PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G291300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family WRKY
Protein Properties Length: 278aa    MW: 31133.9 Da    PI: 7.4984
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G291300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY551.6e-17148215258
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEE.........EEEEES--SS CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvv.........eitYegeHnh 58 
                          Dg++WrKYGqK+++g +++rsYYrCt++  +C+++k v+ ++++ + +         +++Y g+H++
  Brast05G291300.1.p 148 YDGHQWRKYGQKNINGMQHSRSYYRCTYKerNCSATKTVQEQDHNRSSFsyadetvkyTVVYYGHHTC 215
                         59**************************999*********9987766542222211225777777777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-20136216IPR003657WRKY domain
SuperFamilySSF1182902.09E-17142216IPR003657WRKY domain
SMARTSM007748.4E-24147217IPR003657WRKY domain
PROSITE profilePS5081114.493149196IPR003657WRKY domain
PfamPF031067.3E-22149215IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDCNNNNSMA SSPMAARQEI EALLRRQQQL VTQLRALILP SLVSRDNVGG GGASMAELAA  60
QLFDDVIGCN TSAVSSLLRT GGSLFGAVDG DDDKSLVRKK MLSRVISPGE TIRMKQEERA  120
RPVRSVGTKR RRKDGKRSRS LVTNVPHYDG HQWRKYGQKN INGMQHSRSY YRCTYKERNC  180
SATKTVQEQD HNRSSFSYAD ETVKYTVVYY GHHTCNGKSI SNGNIDLPQL VSMDLDQTVD  240
EMAQMSTYQV QEFDEGDLDV PALLEALDNP LLDWDMW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6696617e-56EU669661.1 Triticum aestivum WRKY31 gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010239551.21e-173PREDICTED: probable WRKY transcription factor 66
TrEMBLI1IV021e-172I1IV02_BRADI; Uncharacterized protein
STRINGBRADI4G44350.11e-172(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.11e-14WRKY DNA-binding protein 38